rs6252334 SNP Detail

Summary

• ID
  rs6252334
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:142981031 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAGG GAGTGTGGAA TACATATCTG
  K
  ATATAAGGTA TTAAAAAGAA ATGCT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J	LG/J	SM/J
ss8658112	WI_WGS_4_141030861	WI	MOUSE	f	SNP		G	T
ss147777567	ENSMUSSNP7085260	ENSEMBL	ENSEMBL_Sanger	f	SNP	G			T
ss321403487	CHEV_4_142844364	CHEVERUD	SCREENING_POP	f	SNP					G	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J	LG/J	SM/J
rs6252334					SNP	G	G	T	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:142981031 () rs orientation: forward

Symbol	Name	Function Class
Rr604179	regulatory region 604179	1940 bp distal