rs6252263 SNP Detail

Summary

• ID
  rs6252263
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:142980990 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAATG GTTGACTGAC GTGACAGAGC
  Y
  ACATGACAGA GACTCAAAGG GAGTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J	LG/J	SM/J
ss8658040	WI_WGS_4_141030820	WI	MOUSE	f	SNP		T	C
ss45583872	mCV25307928	ABI	CRAMUS_MOUSE	f	SNP	T			C
ss147777563	ENSMUSSNP1140025	ENSEMBL	ENSEMBL_Sanger	f	SNP	T			C
ss321403486	CHEV_4_142844323	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J	LG/J	SM/J
rs6252263					SNP	T	T	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:142980990 () rs orientation: forward

Symbol	Name	Function Class
Rr604179	regulatory region 604179	1899 bp distal