rs6250858 SNP Detail

Summary

• ID
  rs6250858
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:142980737 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGACATAAG TCACCAATGC
  TTGGTTCAAA AAATATTATC ATGGGGGCAG GGAGTGATCC TGAGATAAGA TTACCCCTGC
  CTGGTACACT GGTGGGGGAC AAACCCAAAA AGAGACAACC CCAGATTATT TGATGCAGTC
  AGATTAGTTG ATGCAGGAAG ACTCACCCTA AATCTAAGTA GCACCTTATA ATGGCAGCCC
  M
  CACACACAAA AAGAAGTGGA TGGCCGGGCG GTGGTGGCAC ACACCTTTGA TCCCAGCACT
  TGGGAGACAG AGGCAGGTGG ATTTCTGAGT TCGAGGCCAA CCTGGTCTAC AGAGTGAGTT
  CCAGGACAGC CAGGGCTACA CAGAGAAACC CTGTCTCAAA AAAAAAAAAA AAAAAAAGAA
  AAGAAAAAAA AAAGATACTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8656629	WI_WGS_4_141030567	WI	MOUSE	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6250858					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:142980737 () rs orientation: forward

Symbol	Name	Function Class
Rr604179	regulatory region 604179	1646 bp distal