rs6250362 SNP Detail

Summary

• ID
  rs6250362
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:149256071 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCCCTCTGG AGGCTGTGTC
  AATACTGAAG ATGAGGCCAT CCTGTGCTGG AGAGACCCTC CCTCAAAAAG GAAAGGGTTG
  GGGGTGTAGC TCTGGTAGAG CATTTGCCTA CCGTGTATAA GTCTTTGGGT TCAGTCTCTA
  AAACCTCAAA AACAAAACAA AACAAAACGA AGGAAAATAA AAATCCCAGA CACAACCCTG
  Y
  CCCTTGGAGT AAATCCTCCC AGGGCGGAGC CCTCTGTTTA ACTTTCGTAA GAGGATGTGT
  CAGCAATGAC TTAGTTGGTA CAGACTTCAA CAGTTCAGCT CGGCCACCAA GCATGCTGTG
  TAGTTCCTAT AATTGAATTC CAGTGGCTGG GGGCAGGCTA GGGAGAAAGC AGTTTTGAAA
  CACACACACA CACACACACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	C57BL/6J
ss8656132	WI_WGS_4_144556502	WI	MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	C57BL/6J
rs6250362					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149256071 () rs orientation: forward

Symbol	Name	Function Class
Rr604853	regulatory region 604853	within coordinates
Rr604854	regulatory region 604854	561 bp proximal
Rr604855	regulatory region 604855	973 bp proximal