rs6250155 SNP Detail

Summary

• ID
  rs6250155
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:100689106 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         tcctacatcc
  gatagagggc taatatccaa catatacaaa gaactcaaga agttagactc cagagaacac
  ccgatcaaaa aatggggaac agagctaaac agagaattct caactgggga aacttgactg
  gccaagaagc acctaaagaa gtgttcaata tagtcatcag ggaaatgcaa atgaaaacaa
  ccctgagatt ccacctcaca ccagtcagaa tgattgagat caaaaactca ggtnacagca
  R
  atgctggcaa ggaagtggag aaagaggaac actcctccat tgctggtggg attgcaagct
  ggtataacca ctctggaaat cagtctgacg gttcctcaga aaattggaga tagtactacc
  tgaggaccca gctataccac tcctaggcat atacccagaa gatgctccaa catgtaaaaa
  ggacacatgc tccactatgt tcatagcagc cattataata gccagaatct ggaaacaacc
  cagatgtccc                                                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8655925	WI_WGS_11_118599580	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6250155					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:100689106 () rs orientation: forward

Symbol	Name	Function Class
Cachd1	cache domain containing 1	Intron
Rr596037	regulatory region 596037	1799 bp proximal