rs6250137 SNP Detail

Summary

• ID
  rs6250137
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:100689099 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         ttactaatcc
  tacatccgat agagggctaa tatccaacat atacaaagaa ctcaagaagt tagactccag
  agaacacccg atcaaaaaat ggggaacaga gctaaacaga gaattctcaa ctggggaaac
  ttgactggcc aagaagcacc taaagaagtg ttcaatatag tcatcaggga aatgcaaatg
  aaaacaaccc tgagattcca cctcacacca gtcagaatga ttgagatcaa aaactcaggt
  R
  acagcanatg ctggcaagga agtggagaaa gaggaacact cctccattgc tggtgggatt
  gcaagctggt ataaccactc tggaaatcag tctgacggtt cctcagaaaa ttggagatag
  tactacctga ggacccagct ataccactcc taggcatata cccagaagat gctccaacat
  gtaaaaagga cacatgctcc actatgttca tagcagccat tataatagcc agaatctgga
  aacaacccag                                                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8655907	WI_WGS_11_118599573	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6250137					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:100689099 () rs orientation: forward

Symbol	Name	Function Class
Cachd1	cache domain containing 1	Intron
Rr596037	regulatory region 596037	1806 bp proximal