rs6247821 SNP Detail

Summary

• ID
  rs6247821
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:131593277 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         CCAGAAGATG
  CACACTGGGT GGAACTGCGG CAAGCAGCAA ACATGAAACC TCCCAGGGCC TCTCCCTGTG
  GAGTCNCAGG CACTATTTTC CTGTGCACGA CAATGTGCAC AGTGTTGCCA GCCAGGGAAG
  GTCGGCTGAG CCTGGGAAGC AGAGAGGTTT TTAACTGGGN TCTGTCACAT GGTTAGGATT
  AATCTATTGG TTGGTTATTC ATACAGTTGC TTTCAGTCTA TAGGTCAGCT GATAACTCAT
  R
  ACTCAAAGAC TCCAACTGTA AACCATGTCG TTGGTCTTTG CAGTACAGCT GAAGCCATGG
  CTTAGCACCA TCATCAGTCA TCATTGGTGG ACTATCATGG TCGGCCCAGG CCCTCAGGCA
  AAGGAGGTAC TTCTTTTAGG AAGAAGAAAT GTAAGGGCTT AAGGACCAAT ACCAGAAACC
  AAAGTTAAAT GCCAGATTTC ATTAGGGGCA AGGATAATTT GTTTTTAACC GTGCACACAT
  ATATAACAAC                                                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8653583	WI_WGS_2_132751911	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6247821					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:131593277 () rs orientation: forward

Symbol	Name	Function Class
Gm30986	predicted gene, 30986	1932 bp downstream
Rr565306	regulatory region 565306	729 bp distal