rs6237322 SNP Detail

Summary

• ID
  rs6237322
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:17627429 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGCTTATGG TGTTTATATA
  GCCATTTATT CCTTTGTTTT GCTAATTGGA TATACCCGAT TTGTCAATTC ATTTATCACT
  TGAAGGCCAT TTGTATTTTT TTCAAGTTCT GACTACTATT AATAATTCTT CTATGAATAT
  TCATGGTAAA TATTCCTGTG TAAGTTTCAT AATTTTTTGG TAGAAGTATT AGAATAGATT
  S
  TTGAGTCCTG ATTTAAGCAG GAAAGACCTG CCAGATGCTT TAAAGAGCCT GCACTGTTTT
  GACGTCCCCA CAAGCAGTCT AAAAACCTCA GTGTCTCTGT TGTTTGGTGT TTCTGTCCTT
  TCTGTGGTGG ACACCTCACA GGCTGTGGAG AACACCTTGG GATTTTGCCT TGCATTTCCC
  TGATGTCTGA AGATGTCGAC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J
ss8643056	WI_WGS_6_17496137	WI	MOUSE	f	SNP			C	G
ss133019216	ENSMUSSNP7125192	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C			C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J
rs6237322					SNP	G	C	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17627429 () rs orientation: forward

Symbol	Name	Function Class
Rr626820	regulatory region 626820	1619 bp proximal