rs6232581 SNP Detail

Summary

• ID
  rs6232581
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:131518363 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGAATATAC TCGGTGCCGC
  AGACTCTGCT CTGAAGACTT GAATGGAGCA TAGCATAGTG TCCTCCCAAG GCCTGACTGT
  TAGGCTGCCT GAACATTCTT ATGTCATCAT AGAATGACTA GACAGTTGTC TCAGAGCAGA
  GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA ATATACATGA CAGAGTGCCC
  W
  AAACAAAAGC CTCAGTTTTT GCACTCCTAT CTAGGAAGTG ACACAACATG ACCTTATGAT
  ACACCATCGA TTGTAGAAAT GAGCCCTGAG ATACATTGGG GGGTGTATGG AGCCACCAGA
  GGTAGGGGCA ATTGGAGTCG GTTTCCACAG TACTTGTGCA TGCATGTCCA AAATGCATGG
  TACAATTTTC TACTACAGTC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8638302	WI_WGS_3_132299033	WI	MOUSE	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6232581					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:131518363 () rs orientation: forward

Symbol	Name	Function Class
Rr585383	regulatory region 585383	475 bp proximal
Rr585384	regulatory region 585384	543 bp proximal