rs6230206 SNP Detail

Summary

• ID
  rs6230206
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:146068271 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         TCTACTGGGG
  AAATGATTCT AGTCAGAACA GATATACTAC TTCTCCAAAA GAAAAGTCAA ATTTTTGTTT
  GTGTGTGTGT TTCTAAGTGA AGCTGCATAA GAAACAGATG TTTTAAATTG CCCCCCCCCA
  AAGTGTAGAT GAAGAGCACT GGTGGACTAA TTTCAAAGGA ATTCAAGTTA GCATAATATT
  CTACCACGAG GAAGTCACCC TTCCTCTCTT CAAGCATCCT CAGATAGCAG AGAGTTTACC
  R
  TTCTTCACAC TGATGCAAAT GCTGCTGTGG GCCGGCTGTG TGTTCTGAGA TCGCTCCAAT
  ATTGGGAGGT CATTAGTGGA AGCTAGTTCA TGATTCTCCC CACCCCCATA CCACAATGAA
  TGATTGGTGG TGAGAGAATA AGGGGGTTAG GCTAGCAACC TGGGTAAGGA GTGAGGAGCC
  AAAAGAGGCT CTTTCCTCGC CGTCATCATT GTCCTGAGGT CCAGGGCAGC GTGCCTGTCA
  TTCACGGGCT                                                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8635923	WI_WGS_2_147259095	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6230206					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:146068271 () rs orientation: forward

Symbol	Name	Function Class
Insm1	insulinoma-associated 1	1331 bp downstream
Rr566646	regulatory region 566646	246 bp distal
Rr566647	regulatory region 566647	within coordinates