rs6224785 SNP Detail

Summary

• ID
  rs6224785
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:12777430 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAAATATCT AACACACAGC
  TATTTGTATA AGCTAGAATT TAAATTAGGC ATATTTTATA AGAAGCTTAG CAATTACTTT
  TTGTTAAGTA TGGAAAACCA TGATAGAAAG ATTGTACGGG AGGATGCTGG ATGCTGGGAT
  TATAGTCCTT GGTTGCAAAA TGGCATTCAC TGGTATTTGT ATCCGATTCA GGGGCTACTG
  S
  TGATTCCAGT GTTTGACAGA AATAAGTCAG ATATAAAGTA TACCATATGA CTTCAAATAC
  AAATATTACA TTTTACAATT CATCTATTCT CAAAGATGAA GGGAATTTAA TTCTATATTA
  TTCAACTTAC CATTCCTGAG GTCACACCAG AATGCAGCAA ACTTAGAACT TCTTTAACAA
  TAATAATTAC ATGGCTTTTT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8630489	WI_WGS_4_12267183	WI	MOUSE	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6224785					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:12777430 () rs orientation: forward

Symbol	Name	Function Class
Rr589102	regulatory region 589102	1211 bp distal