rs6216583 SNP Detail

Summary

• ID
  rs6216583
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:131517815 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCAAATGCC TTTCTGAATT
  ATACTTCATC TCATTTGTTG ATATAGGTTC TCCAGCTGAA CCTGGATTTT ATGATTTGGA
  TAGTCTGTCT GGCTAGCAAG CTCCAGGCAT CCTCTTGTCC CTGCCTACAT AGTGCTGAGA
  TAATACGCAC ATGCTGGCAT GTCATGCTCT ACACGGGTGC TCGGGACTGA ACTCGGTCTT
  W
  GTGCTTGCAT AGCAAGTAAT GCCTTTAATG GCTGAGCCAT TTCCCCAGCC CCACTTTTGA
  ATCTTATTCC ATTGAGGTAG GTATATCAGA GAAAATGCAG TGCATGGAAA TGCCAGTGGC
  TTTGAAAAAA AAATAGTCGA GGTGGTTATG AACATTTTAG AGATATTTGA ACACACCCAA
  GAATTATGTG TATATATGCA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8622259	WI_WGS_3_132298485	WI	MOUSE	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6216583					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:131517815 () rs orientation: forward

Symbol	Name	Function Class
Rr585383	regulatory region 585383	1023 bp proximal
Rr585384	regulatory region 585384	1091 bp proximal