rs6209833 SNP Detail

Summary

• ID
  rs6209833
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:115511796 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         CCCTTTCCTC
  TTAGTTGCGA TGAGAGCAAG CTGAAGAGGG ACTAGACAAG AGGTACTGAA CCTCAATCTC
  TTTCTCTGCC AATGCGAAAA GGGGAAACTG AGCTCTCCTG CAGCCAGCAT GCTGGATATT
  CCATGAACAT CTGTGTCTGT CCCAACCTGG CAAGGAACAT GACACCAGCT CGAAATTCTT
  GGCAGAAAGC ATGGCATTTG GCCCTGCTCC ATAGACAGCC GAGAAGGGCT CAGAGAAGGG
  R
  AAGAGTCTGA GGAAGGTTCC GGAGCACGTG ACTAGCTTCT TCCATCAGCA GCCCTTATAC
  AAACAGCGTG CTTCCTCCAT TCACCAGTCC TGGGGACCGC ACATGAGGAA TTTTTTTTTC
  CTCTCCTCAT TTTTTTTTTG CTGATTAAGT TCCCCCAAAA GCCCCTTAAG AATTTTAATA
  AGAAATGCAA AAATCAACAA AAGTGCAGCA AAGCCTTTCC TGTTATTAAA TAAGGGAAAG
  TAAATATTGC                                                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8615494	WI_WGS_6_116318388	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6209833					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:115511796 () rs orientation: forward

Symbol	Name	Function Class
Gm36355	predicted gene, 36355	within coordinates
Rr636981	regulatory region 636981	within coordinates