rs6209015 SNP Detail

Summary

• ID
  rs6209015
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:169942340 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGGTTGAGA ACCAGGGCAC
  GTGCTAGACT GGCACTCAGC TGCTCAGGGG GTAGTGTAAG TGGAGCCAGG GCTAAGTCCA
  GGTCCGTTTT AGTGGGTCAT AGATAAGAAT CTCAGAGCTT GCTGGGCAGT GGTGGTGCAC
  GCCTTTAATC CTAGCACTTG GGAAGCAGAG GCAGGCAGAT TTCTGAGTTC GAGGCCAGCC
  K
  GGTCTAGAGA GTGAGTTCCA GGACAGCCAG GGCTACACAG AGAAACCCTG TCTTGAAAAC
  CAAAAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG
  AGAGAGAGAG AGAGAGAATC TCAGAGATTT GGGGTCAGAT GTGACTTCTT GTAAATGGAG
  TTATAGTTTT TATTTTTATT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8614670	WI_WGS_2_171107150	WI	MOUSE	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6209015					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:169942340 () rs orientation: forward

Symbol	Name	Function Class
Rr571323	regulatory region 571323	630 bp proximal
Rr571324	regulatory region 571324	934 bp proximal
Rr571325	regulatory region 571325	1934 bp proximal