rs6208158 SNP Detail

Summary

• ID
  rs6208158
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:115511472 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         TTAACATAAT
  TATTTCTATT AGAATGGAAA TATAAAAACT AAAATCTTGA AGCTACTTGA AGCCCTTATC
  AGGAAGCAAG GGTGGTAGTT ATAAAATTCT AAAACTTAGG ACACGCTATA CTCAAAGCAT
  TATGCTGTCT GATGAGGCCG TGGAGTAAGG TCCAATAAAC ACGCGTGATG ACCAGGTAGA
  GTACAGCTCC GGNCAccgag ctctgctatc ctatagctgt gtgacccaga acaagttacA
  R
  CTAGGAGTCA TCTCCCTGTC CCCGAGAATT GCTGTGGAGC ACAGTCAAGT TGGGAGTGTG
  TGACTACTGC CAGCCCTTTC CTCTTAGTTG CGATGAGAGC AAGCTGAAGA GGGACTAGAC
  AAGAGGTACT GAACCTCAAT CTCTTTCTCT GCCAATGCGA AAAGGGGAAA CTGAGCTCTC
  CTGCAGCCAG CATGCTGGAT ATTCCATGAA CATCTGTGTC TGTCCCAACC TGGCAAGGAA
  CATGACACCA                                                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8613810	WI_WGS_6_116318064	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6208158					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:115511472 () rs orientation: forward

Symbol	Name	Function Class
Gm36355	predicted gene, 36355	within coordinates
Rr636981	regulatory region 636981	147 bp proximal