CATGGTCCCT TGGTATTGCT TTCCTGTATT CAGGTTCAAT AACTTTTTTT TTAACTTTCT TAAAACTCCA AGGCACACAT ACATACGGTT GTATATGAAT GCATCTATGT AACATGCCTT AGCACAGTTC CAATTTAGAA ATGAGATACC ATTTCTTTGC TACAGAGATT AGGGTTGACT TAGTGTGTGC CGACAATAGT R AAATGACACA GGAAGTAGCT TCAGAAGCAG AGAACATCAG AGAGAAAGGC GGAGAGGGGT AAAGTGAGAG ACTAGTGTGC CAATTATCTA CTGCTTCAGT AACAACCTGC CCCCTAATGT AGTACTAAGA CCACAGCTGC TTTCTTTGTT CTCCATTGCG TAATTCAGAC TGAGCTGGGG GTTCCCCTAA CCTGAGGTTA R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | C57BL/6J |
CZECHII/EiJ |
---|---|---|---|---|---|---|---|
ss8611523 | WI_WGS_3_100921647 | WI | MOUSE | f | SNP | G | A |
SNP Consensus Information | |||||||
SNP | Consensus Type | C57BL/6J |
CZECHII/EiJ |
||||
rs6205874 | SNP | G | A |
Location: Chr3:100726979 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm32720 | predicted gene, 32720 | 729 bp downstream | ||||||
Gm40107 | predicted gene, 40107 | 1910 bp upstream | ||||||
Rr581909 | regulatory region 581909 | 298 bp distal | ||||||
Rr581910 | regulatory region 581910 | within coordinates | ||||||
Rr581911 | regulatory region 581911 | 104 bp proximal | ||||||
Rr581912 | regulatory region 581912 | 1202 bp proximal | ||||||
Rr581913 | regulatory region 581913 | 1857 bp proximal | ||||||
Rr581914 | regulatory region 581914 | 1993 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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