rs6205000 SNP Detail

Summary

• ID
  rs6205000
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:170283836 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATGAATACC TCTTTTCCAC
  CCAGAACTCT GGGAGTGGAT GTTGTTAATG GCCTGGTGAT CTTTGCTATC TGAAGGGCCA
  GACCTTATCC AAATCCCCTG GGATGTTCAT CCTAGACTCT CCCTCCCTAG GCCTTTATCT
  TTGGCTCCCA GTTAATAGAA CTTATCCCGG AGGGTGGGGG AGGTCACATG TAATTTACAG
  M
  CTGCTGACCT CTTTGCTATC TTGGCTCAGA GACCACACCA GATCCAAGTT TCTTAAGCTA
  TGAAACCCAT CTCCATGGTC ACATGTACTG TGCAAGAGGG TTTCTGTGTA GTCACACTCT
  GAGCTTTATT GAGCACCTGG AGTGGCAATG ATTGTTGTCT GGAAACCTTT CTCCAAATTG
  TGATTTGTTT CAATTTGATT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8610647	WI_WGS_2_171453868	WI	MOUSE	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6205000					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:170283836 () rs orientation: forward

Symbol	Name	Function Class
Gm74953	predicted gene, 74953	within coordinates
Rr571442	regulatory region 571442	574 bp proximal
Rr571443	regulatory region 571443	734 bp proximal
Rr571444	regulatory region 571444	809 bp proximal