rs6203608 SNP Detail

Summary

• ID
  rs6203608
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:78876535 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACAGCATAC CACACACACA
  CACACACACA CACACACACA CACACACACA CTAAGCATAT AAATAATAAT ACAATGTATT
  GTAATAAAAT TCTGTCAAAG AACTAACAAC AGCCACGACC AAAACACCAA GAAGGTTGTG
  AATTCTACAA GATGGTTATC ATTTGAGAAC TCCAAGAAGT CCTCTATATT AACCATATTT
  R
  CAAGCTTCCT TCCCCCGCCC TCTAGAGTAA AGAATAAAGC TGCAGAGAGG ACTCTCAGAC
  AATCCATACT TCAAGGGAGA TTATGGGACC AGTACAACTG CTAAGAAGAA TCAGGAAAAC
  AGCAGAGCTG CCTGGAAAAA CATTTGCACC ACAGTCACTT GTAAGGGACA CTCTCCATCC
  TGTTGATCTT CCTCAGACTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8609252	WI_WGS_6_79796391	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6203608					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:78876535 () rs orientation: forward

Symbol	Name	Function Class
Rr632520	regulatory region 632520	500 bp proximal
Rr632521	regulatory region 632521	583 bp proximal