rs6202953 SNP Detail

Summary

• ID
  rs6202953
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:78876385 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    cgggtacac aatgtacaac ctccaaacca
  ccgaaaattc taataatgaa atatctgaca cattctggcc accATCAACA ACTTTGCAAA
  TGcatacata cacagcatac cacacacaca cacacacaca cacacacaca cacacacaca
  M
  TAAGCATATA AATAATAATA CAATGTATTG TAATAAAATT CTGTCAAAGA ACTAACAACA
  GCCACGACCA AAACACCAAG AAGGTTGTGA ATTCTACAAG ATGGTTATCA TTTGAGaact
  ccaagaagtc ctctatatta accatatttg                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ	LG/J	SM/J
ss8608596	WI_WGS_6_79796241	WI	MOUSE	f	SNP	C	A
ss321832866	CHEV_6_78849396	CHEVERUD	SCREENING_POP	f	SNP			A	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ	LG/J	SM/J
rs6202953					SNP	C	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:78876385 () rs orientation: forward

Symbol	Name	Function Class
Rr632520	regulatory region 632520	650 bp proximal
Rr632521	regulatory region 632521	733 bp proximal