rs6201826 SNP Detail

Summary

• ID
  rs6201826
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:78876182 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCAGACAGG ATTATCTTGG
  TTTGGAAAGC TTTTGGCAGA AGTACTTTTA AACAATTAAC TTAACCAAAA CATAATGAAA
  ATGTTAACAG AATATAGCAA AATACTAGCA TACATTTCCT GTACTCCATT AAAAAATACA
  TACAGTGTTT TTCATTCATA TTTTATGACT AAAATTTTAG TGATGGAACT CATACGATGA
  M
  ATAGTGTTGA AAATCACTTA TTGCTCTTGC AGGAAGACTC AGATTTTGTT CCCCGGGTAC
  ACAATGTACA ACCTCCAAAC CACCGAAAAT TCTAATAATG AAATATCTGA CACATTCTGG
  CCACCATCAA CAACTTTGCA AATGCATACA TACACAGCAT ACCACACACA CACACACACA
  CACACACACA CACACACACA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ	LG/J	SM/J
ss8607467	WI_WGS_6_79796038	WI	MOUSE	f	SNP	A	C
ss321832865	CHEV_6_78849193	CHEVERUD	SCREENING_POP	f	SNP			C	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ	LG/J	SM/J
rs6201826					SNP	A	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:78876182 () rs orientation: forward

Symbol	Name	Function Class
Rr632520	regulatory region 632520	853 bp proximal
Rr632521	regulatory region 632521	936 bp proximal