rs6200836 SNP Detail

Summary

• ID
  rs6200836
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:130807122 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         CCCTGGGGAA
  AACCAAGGCT ACTCAACTCC AACACGGAAC AGCTCACCTC AGTGCCACTT CAGGGACCAA
  GGAGGAGAGA GGGAGGCAGG GGGTGTGATG NGATTGTGGG GGTCGGAAAG TCTTCACAGA
  CCAACCTGAT CCTGACCAAC AGAAGGAAGT GGAACCGAAG GTCACAGAAA GAGCTGCACA
  AACCTCACTC GGTGAGTTAC TAATACAAGG GGACATGATG TTAGGGTAGC AAGGAGGATG
  R
  GGGTCGATCT TGGAGTTGTT ATGAGGATAA GTGAGGGGTG AATATGATAT AGATATANTG
  TGCAAAATTC TCAAAGAATG AGCAAAAACA ANGTAATTTT AAAGATACAA AAGCAATCGA
  TTTCATACGA AAGAAAAGAA ANTTCCAAGC ATAGACCAGA GCACAGCAGA GTCTAAATAG
  GGCAAGACAT TTGGGGACTT TGGGACAAAT CTTGGCATTT ATGGTGTCAA AACAGGATCA
  CTGAGAAGTC                                                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8606475	WI_WGS_3_131569506	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6200836					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:130807122 () rs orientation: forward

Symbol	Name	Function Class
Rr585250	regulatory region 585250	507 bp proximal