rs6199499 SNP Detail

Summary

• ID
  rs6199499
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:51114167 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCATTCAGT GGTCTTCTTC
  TTCTACCCAA GTGGTCTCAC TTGCGCATCA GGCAATCTCC AGTTTCATGG GGGAGGTTTG
  GGCTGTGTGT CCTAGCAACT CAGGCAGCCA ACAGGAATGC TTCCTGTGCA AAAAAGGTCA
  TAGCCCGGAG CTCTGGTTAG AGCCGTGCAG GATCTTATTG CTGTTCTCAG TTATTTCCCC
  R
  TAATCTCTCC CTAGCGGTCC GGCTGACGAT AGCCTAGAAT ATTTGAGCAC AGTAATTTGC
  GAGATTTATG GAAAACAATT TCTCAGGAAT GTGCTCTCAA TTTTCACTGG GCAAATCCCT
  CTTTCCCCTG TAAGTGCTGG GGCATATGGG ACAGGTAAAT GTCTTAATGG GTAGCATAAA
  AGTAACATTT TTTTCTGGCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8605134	WI_WGS_3_51640712	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6199499					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:51114167 () rs orientation: forward

Symbol	Name	Function Class
Rr576240	regulatory region 576240	within coordinates