rs6196932 SNP Detail

Summary

• ID
  rs6196932
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:106078106 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCCAAGCAG GCCCTGTGGT
  GCCAGTGATA ACTACCTGCC TGGGCACGGA GAAGCTGTTC CCATGTCGGC CTGATGGAGG
  GGCTTGAGAT TTTTCGCTCA GCAATGCGCT TTTCTCCAGA AAGGCCCCAC GGGAGTTTCT
  CCAACCACAT GGTCTGTTCA TGGGCCTGTG TAGTCAGGCA GCGGTGCCAA CAAGAACATT
  Y
  CCCAGGGACT GCCTGGCAGG AACTGCTGGC CAATCAACTG CGCCAAAGCC TGCCCCCTGG
  GCATCTTCAT AGGCCCCCTC GACAATCTCT AGGCAAGAGG GACTCTGGAA TTTACAAGGC
  CAAAAAGAGG CTCTTAAATA ACTTTTAATT TATTTTCAAA AGAAAATGGA AGGGCGGAGG
  CTGTAACACA CACCCTCCAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8602562	WI_WGS_4_103935732	WI	MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6196932					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:106078106 () rs orientation: forward

Symbol	Name	Function Class
Gm12729	predicted gene 12729	within coordinates
Rr596704	regulatory region 596704	within coordinates