rs6196714 SNP Detail

Summary

• ID
  rs6196714
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:81821698 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCGTT CTTGCTGATC GAGTCCGGCG
  M
  GCGCAAGAAA AGCCTAAAAG TTATC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	CZECHII/EiJ	LG/J	SM/J
ss8602343	WI_WGS_7_71683489	WI	MOUSE	f	SNP			A	C
ss145171498	ENSMUSSNP3788460	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss322288135	CHEV_7_89316836	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	CZECHII/EiJ	LG/J	SM/J
rs6196714					SNP	C	C	A	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:81821698 () rs orientation: forward

Symbol	Name	Function Class
Gm45089	predicted gene 45089	715 bp downstream
Gm73333	predicted gene, 73333	within coordinates
Tssr67529	transcription start site region 67529	1848 bp upstream