rs6194682 SNP Detail

Summary

• ID
  rs6194682
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:83325729 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         tctgtaccct
  attttaatgg ggttatttga atttttggaa ttcagcttct tgagctcttt gtatatattc
  ctagttcaat ttttatgaga ggctttatcc agcaattgat ggaaatagat gcaaagaccc
  acagccaaat gttaggtgga gttttaggaa tccctcagaa cagggggaag gattgtagga
  gtcaatggta ttaaggacac caaagaaaac ccacagaatc aattaacctg ggcccgtaag
  R
  gctcaatgaa cctgaaacac taaccaggga gcatgcatgg gattgacctg gtctccctct
  acatatgtta cagttgtgta tgtaggttag tcttcttggg ggacccctat aagtggaacc
  agtggctgtg tctgattctg ttgccagcca gcctttggga ccttttcttc ctactgggtt
  gccttgtgta ggaaaggagg tgcctagtct tactgcaact tgatatggct ggttaataac
  tgtgggaggc                                                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8600304	WI_WGS_3_84117040	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6194682					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:83325729 () rs orientation: forward

Symbol	Name	Function Class
Rr578858	regulatory region 578858	1666 bp distal