rs6193006 SNP Detail

Summary

• ID
  rs6193006
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:94263757 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGAT TCCTGGCATA CTCCCAGTCA
  Y
  GAGTACCTGA CTCCTAATAC TTCAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C3H/HeJ	C57BL/6J	LG/J	SM/J
ss8598621	WI_WGS_6_95071370	WI	MOUSE	f	SNP	T	C
ss321866914	CHEV_6_94236770	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	C3H/HeJ	C57BL/6J	LG/J	SM/J
rs6193006					SNP	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:94263757 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17759	CpG island 17759	1951 bp distal
Gm31661	predicted gene, 31661	within coordinates
Rr634859	regulatory region 634859	1734 bp distal
Rr634860	regulatory region 634860	within coordinates
Rr634861	regulatory region 634861	802 bp proximal