rs6192421 SNP Detail

Summary

• ID
  rs6192421
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:94263627 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTGT GTTGCTATAC AACACTAAAG
  R
  CCTCAGATTT AGCATCTTGA TCCCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C3H/HeJ	C57BL/6J	LG/J	SM/J
ss8598033	WI_WGS_6_95071240	WI	MOUSE	f	SNP	G	A
ss321866913	CHEV_6_94236640	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	C3H/HeJ	C57BL/6J	LG/J	SM/J
rs6192421					SNP	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:94263627 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17759	CpG island 17759	1821 bp distal
Gm31661	predicted gene, 31661	within coordinates
Rr634859	regulatory region 634859	1604 bp distal
Rr634860	regulatory region 634860	8 bp proximal
Rr634861	regulatory region 634861	932 bp proximal