rs6191944 SNP Detail

Summary

• ID
  rs6191944
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150649149 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTTGACAT AAAAGGAGTC
  CAGGGTGAGT ATTTAATAAT GCAGGATGTT AAACATTTTG GGGGTTGTTT AGAGTTATTC
  AATAACATGA TTGTATAATG ATTGTATAAC ATCAATGTTG AGATCACAGC TTCACATAAT
  ATGTAGTTAT GTTATGTACA AAATGGCTGG AGTATGATTA GGGCCTTTTC GGAAATGGCT
  R
  AAATTCTGTT CTAATCCCAA GCCAGAATTT GACAATTCTT TTTATGAAAC TCAAACATCT
  GTCTTTATTA AAATTTTTTT TCTTAAATAT TGTTTATTTC TGTGTGTCAC AATGTTTGTG
  TTGGGACTTT GCATGCCATA AGTCTCATTT AGAGGTCCGA GGACAATTTG CAGGTCCTAG
  GGATGGAAGT CCGGTTGTCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8597555	WI_WGS_4_145961439	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6191944					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150649149 () rs orientation: forward

Symbol	Name	Function Class
Gm13091	predicted gene 13091	within coordinates
Rere	arginine glutamic acid dipeptide (RE) repeats	Intron
Rr398883	regulatory region 398883	1489 bp upstream
Rr605335	regulatory region 605335	1085 bp proximal
Tssr40414	transcription start site region 40414	1182 bp downstream
Tssr40415	transcription start site region 40415	1763 bp upstream
Tssr40416	transcription start site region 40416	1866 bp upstream