rs6186269 SNP Detail

Summary

• ID
  rs6186269
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:108177746 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCCTGCCAAG ACCCTAGGGC CGGGACTTCT GATTCCATCC
  ATCTGAAGTG TAAGTTGAGG GCTTGCATTT CTAGCAATTC CCTGGGTAGC AGGCAGTGCT
  R
  CTGCCGTTGC TGCTGCTGAT CTGAAGGGCA GCTCTGTGAG AACCCTGAGT ATTCCTCAAA
  AGTCAAGCAG TCCTCCCTAA TTGCAATTGA ATGATCTTA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J
ss8591858	WI_WGS_6_109040173	WI	MOUSE	f	SNP		A	G
ss133497274	ENSMUSSNP1167958	ENSEMBL	ENSEMBL_Sanger	f	SNP	A			G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J
rs6186269					SNP	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108177746 () rs orientation: forward

Symbol	Name	Function Class
Rr636050	regulatory region 636050	1598 bp distal