rs6176022 SNP Detail

Summary

• ID
  rs6176022
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:149652965 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAAAA TCAAAACAAA ACAGGGTCTC
  R
  TGTATCCCAG GCTGGCTTCA CATTA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8581581	WI_WGS_4_144958461	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6176022					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149652965 () rs orientation: forward

Symbol	Name	Function Class
Gm13066	predicted gene 13066	718 bp upstream
Gm70645	predicted gene, 70645	within coordinates
Rr604967	regulatory region 604967	844 bp distal
Rr604968	regulatory region 604968	729 bp distal
Rr604969	regulatory region 604969	314 bp distal
Rr604970	regulatory region 604970	86 bp proximal
Rr604971	regulatory region 604971	986 bp proximal