rs6164763 SNP Detail

Summary

• ID
  rs6164763
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150304355 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTGAA ACAGGCTCTT TCTACGTGAA
  M
  TCTGGAGTAT GGCCTCCAAC TATGA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J	LG/J	SM/J
ss8570294	WI_WGS_4_145613605	WI	MOUSE	f	SNP		A	C
ss148050384	ENSMUSSNP4202140	ENSEMBL	ENSEMBL_Sanger	f	SNP	C			C
ss321428669	CHEV_4_149594007	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J	LG/J	SM/J
rs6164763					SNP	C	A	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150304355 () rs orientation: forward

Symbol	Name	Function Class
Rr605228	regulatory region 605228	1762 bp distal
Rr605229	regulatory region 605229	94 bp distal
Rr605230	regulatory region 605230	173 bp distal
Rr605231	regulatory region 605231	177 bp proximal
Rr605232	regulatory region 605232	422 bp proximal
Rr605233	regulatory region 605233	437 bp proximal
Tssr44739	transcription start site region 44739	803 bp downstream