rs6163481 SNP Detail

Summary

• ID
  rs6163481
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:120430037 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGAGCAAAA GTGACCTTGG
  TGGCAGAGAT GGAAGGTACT CAAGAACAGA TAGAGGCCTC CCCACTGAAG TGAAAGCTGC
  TTTAGAGGAG TCTTCACCAA CAGCGAGGCC CGGGTGGAGT GGTTTCCCTA GGGCACCAGC
  CAGACATTAA TAGCAAGCTG GTGACCTCTC CCACTGTAAG AGGAGGGAGT CGTCCTCCCT
  R
  GAGTAGATAT ATTTTTCCAG ACATGAACTT TCTTTCCTGC ACAGTGCTTC TGCTAACATG
  CCCATCTGCA GACCGGTGGG CTGTCTCATT CAACTGTCCT GCCCACAGAT CACATCTGAT
  CAGAGAACCA ATCTCACAGC AAGGGAAGAC GAGCAATAGG CTTGTGCCTG AGCACTCTCG
  CCACAATCAC CCAGAAGCCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8569003	WI_WGS_6_121252386	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6163481					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:120430037 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17921	CpG island 17921	1179 bp proximal
Rr637856	regulatory region 637856	375 bp distal
Rr637857	regulatory region 637857	1177 bp proximal