rs6159299 SNP Detail

Summary

• ID
  rs6159299
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:148573482 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGAACATCG TCGCTTTCCC
  TCGCACTGAG GGCCCCTGGC ATAGACAGAG GAAAAGAGAA CAAACACTTG TTGTGAGACT
  GAAAAGCATC AAGAACACAA GGCTTGGGAA ACAAAGCAAA CGCCCACACG GTGGCAAGAC
  TGGTGATTTA CATTGCCTTC TGAAAAACAC AGGAAGTGCT GGTGCTGTAG AGATGACTGA
  K
  GGTTAAGAGA GAGTGCTTCC TGCTCTTCCG GAGCCCTGAG CTCTGCTTCC AGAACGCATT
  TCAGGTGGCT TGTGACCACG TGTCCATCTG TCTGTCTGCC CCCCACCCCC ACTCTCTCTC
  ATGAACACAC ACACAGTAAA AATGAATACA TGGAGTTGGT AGTGAGCTTG CCTAATCTAT
  ACCAGGATTT GTGTTCAATT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

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SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8564812	WI_WGS_3_149403674	WI	MOUSE	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6159299					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:148573482 () rs orientation: forward

Symbol	Name	Function Class
Adgrl2	adhesion G protein-coupled receptor L2	Intron
Rr587218	regulatory region 587218	within coordinates