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rs6159126 SNP Detail
Summary
  • ID
    rs6159126
  • Variation Type
    SNP
  • Alleles
    A/C
Genome Location and Flanking Sequence
  • Location
    Chr3:9617789 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                GCAGCGCTCG CTCCCTTCAG
    CTCTGTATCA GCTTCCTGTT AACTTGACCC AAGCTGGAGT CATCTCGGTG GAGAGAAAGC
    CTCCATCAGA CTGGTCTGCA CAGCTCAGTG AAGCAACGTC TTGATCAATG ACTGAAGTGG
    AGGGTCCAGC CCACTCTGGG TGGTGCCATC CTTGGACAGA CAGTTCGGGG TTATACAAGA
    M
    AGCCGGCAGG ACAAGCAGTG GCAAGCCAGT GATTAGGCAG CAGTCTCTAT GGCTTCTGCA
    TCAGTTCCTA CCCTGCTTGA GCTCCTACCT GGCTTTCCTC AATGACAGAT GTGCAAGCCA
    AAGGAATCCC CTCCTCTCGG CTGCTTTTGG TCACTCTATT TATCAGAGCA ATGGAAACAT
    AGTAGGATGA ATTCCAAATA                                            
    
    M = A/C
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
C57BL/6J
CZECHII/EiJ
ss8564639 WI_WGS_3_9589191 WI MOUSE f SNP C A
SNP Consensus Information
SNP Consensus Type
C57BL/6J
CZECHII/EiJ
rs6159126 SNP C A
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr3:9617789 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gm65791 predicted gene, 65791 987 bp upstream
Rr573443 regulatory region 573443 1428 bp distal
Rr573444 regulatory region 573444 112 bp distal
Zfp704 zinc finger protein 704 Intron

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory