rs6157616 SNP Detail

Summary

• ID
  rs6157616
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr15:39694189 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         gtggcacatg
  cctttaatcc cagcactcgg gaggcagagg caggtggatt tctgagttcg aggccagact
  ggtctacaaa gtgagttcca ggacagccag ggctatacag agaaaccctg tctcaaaaaa
  CCAAaaataa ataaataaat aaataaataa ataaataaat aaataaataa aAATTCCTAA
  TGGCTCATTG CTCCCCTCCT CAACTTTTAA AAGAACAAAC CTCATGCAAA AAGTGTAAAG
  W
  AGGAAGATAG AGTCCAGGAG TCCATAAGCT AAAGTATGAA ACCACAAAAC TTCAACCTAA
  TTGCACATCT AAAAATACGG CAAGCGCGAT CGAGACCACA GGTATGGACT GTAGAACTTT
  CATATCTCTT CACTTGACGT CACAGCAACA CCTCACNATG CTTTGATAAA GAAGAAATTG
  ATGCTCAATG AAACGAACTG ATCTGCCACA CATGGGCAGT GACGNAATCA GACTTAAAGG
  CTTCCTCCTC                                                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8563120	WI_WGS_15_40006618	WI	MOUSE	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6157616					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:39694189 () rs orientation: forward

Symbol	Name	Function Class
Dpys	dihydropyrimidinase	Intron
Rr501538	regulatory region 501538	1515 bp distal
Rr501539	regulatory region 501539	436 bp distal