rs6156303 SNP Detail

Summary

• ID
  rs6156303
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:39513494 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCCA GCCTGAGTTA AAATATTTTT
  W
  AAACTACCCA AGCTAAAGAT AATAC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	CZECHII/EiJ	DBA/2J
ss8561802	WI_WGS_3_39340278	WI	MOUSE	f	SNP		T	A
ss134850470	ENSMUSSNP1148680	ENSEMBL	ENSEMBL_Sanger	f	SNP	T			T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	CZECHII/EiJ	DBA/2J
rs6156303					SNP	T	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:39513494 () rs orientation: forward

Symbol	Name	Function Class
Gm30063	predicted gene, 30063	1435 bp upstream
Rr575757	regulatory region 575757	964 bp proximal
Rr575758	regulatory region 575758	1533 bp proximal