rs6155625 SNP Detail

Summary

• ID
  rs6155625
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:6559918 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATAGTGAT CACTTCCTAA
  TGGCCAAGCA TTTAAATATT TGGGTCTATG GGGGACATTC CTATTCAAAC CAACATAATT
  GGTAATTTGA AATGCAAATG AAAGTAAAAA TTAATCAATA CTACTAGTGG AGTGTTTAAA
  GTAAATGAAG GAAAGATGCT TGCATACAGC CAGCATTTTT GGAAAGAAAG TTGTCTATTA
  Y
  TGAGATGTTG GTCATTTTAA ATCAATCATA TGATATGTAA GTATCATTAA GTATAATGAA
  TGTATTTTTA ATTGAACCTT TCATTTTAAA ATATTATTTT ATCTAGAAAG TATAGCAATA
  ATTTTTCTAG GGCCCGCAAT GGAGGAACTA GAGAAAGCAC CCAAGGAACT AAAGGGAACT
  GCAACCCTAT AGGTGGAACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8561123	WI_WGS_4_6036682	WI	MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6155625					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:6559918 () rs orientation: forward

Symbol	Name	Function Class
Rr588410	regulatory region 588410	1728 bp proximal
Rr588411	regulatory region 588411	1825 bp proximal