rs6155133 SNP Detail

Summary

• ID
  rs6155133
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:39513258 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGCAGACT CTATGGTTTG
  TTTCACATGA TTTCAAAGAG AATCGGATTT TTAAAGTCCA AGTTAGATAG TAGGGACTGG
  ATCACATCAT GGTCACTTCA TGAATCACAG CCACCAGGTT CCTGCCTGCT ACAGTGGGAA
  GCTAAGCACA GCCTCTTCAC AGTAGATTGC TGTGAAATAT AACCATCCCA TATCTTTGAG
  M
  TATTATGTAC TGACTTTCTT TTATATACTT TTTATGTTTC CTTGCATGTA TATCAGTGCA
  CCATTTGTGT GCCTGGTACC TTCAGAGAAC AGAAGAGAGT ATGGATTCTT TGTGACTAGA
  GTTACAGACT TTTGTGAGAT AGGTTGTGGA TTCTGAGAAC TGAACCCAGG ATCTCAAGAG
  CAGCCAATGC TCTTAAGTGC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8560630	WI_WGS_3_39340042	WI	MOUSE	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6155133					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:39513258 () rs orientation: forward

Symbol	Name	Function Class
Gm30063	predicted gene, 30063	1671 bp upstream
Rr575757	regulatory region 575757	1200 bp proximal
Rr575758	regulatory region 575758	1769 bp proximal