rs586476804 SNP Detail

Summary

• ID
  rs586476804
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:142439542 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCCT CCCTCCCTCC CTCCCTCCCT
  M
  CCTCCTTCCC TCCCTCCCTC CTCCC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	C57BL/6J	CAST/EiJ	CZECHII/EiJ	KK/HlJ	MA/MyJ	NON/ShiLtJ	NZO/HlLtJ	PWK/PhJ
ss915726501	MGP_WTSI_2_142597622	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	C	A	C	A	A	C	A
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	C57BL/6J	CAST/EiJ	CZECHII/EiJ	KK/HlJ	MA/MyJ	NON/ShiLtJ	NZO/HlLtJ	PWK/PhJ
rs586476804					SNP	A	A	C	A	C	A	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss915726501	MGP_WTSI_2_142597622	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:142439542 () rs orientation: forward

Symbol	Name	Function Class
Rr566224	regulatory region 566224	1490 bp proximal