rs586379413 SNP Detail

Summary

• ID
  rs586379413
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:147511812 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAGTG CAATATGCCC TCAAGCTCAG
  A
  GACAAATAAA CCCTTTCTTC CTAGT                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	CE/J	DBA/2J	FVB/NJ	I/LnJ	LEWES/EiJ	RIIIS/J	SPRET/EiJ
ss917137999	MGP_WTSI_4_147427355	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	CE/J	DBA/2J	FVB/NJ	I/LnJ	LEWES/EiJ	RIIIS/J	SPRET/EiJ
rs586379413					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss917137999	MGP_WTSI_4_147427355	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:147511812 () rs orientation: forward

Symbol	Name	Function Class
Rr398813	regulatory region 398813	506 bp upstream
Rr398814	regulatory region 398814	1415 bp upstream
Rr398815	regulatory region 398815	1855 bp upstream
Rr604485	regulatory region 604485	1136 bp distal
Rr604486	regulatory region 604486	1222 bp distal