rs586027631 SNP Detail

Summary

• ID
  rs586027631
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:6159210 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCAA GCCTTGATGG GGGGGGGGGG
  T
  GGAAGAGAGA GAGAGAGAGA GAGAG                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CE/J	MA/MyJ	NON/ShiLtJ	RIIIS/J
ss925327309	MGP_WTSI_6_6159210_mm38	EVA_MGPV3	EVA_MGPV3	f	SNP	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CE/J	MA/MyJ	NON/ShiLtJ	RIIIS/J
rs586027631					SNP	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss925327309	MGP_WTSI_6_6159210_mm38	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:6159210 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr626212	regulatory region 626212			89 bp proximal
Rr626213	regulatory region 626213			1553 bp proximal
Slc25a13	solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13			Intron
				Noncoding-Transcript-Variant