rs585999240 SNP Detail

Summary

• ID
  rs585999240
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:136857267 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTACT ACTACTACTA CTACTACTAC
  T
  ACTACAAATG AAATATCACT TTGGC                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	C3H/HeH	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C58/J	CAST/EiJ	CE/J	CZECHII/EiJ	I/LnJ	KK/HlJ	LEWES/EiJ	MA/MyJ	NOD/ShiLtJ	NON/ShiLtJ	QSi3/Ianm	RIIIS/J	SJL/J	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
ss916462669	MGP_WTSI_3_137151506	EVA_MGPV3	EVA_MGPV3	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	C3H/HeH	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C58/J	CAST/EiJ	CE/J	CZECHII/EiJ	I/LnJ	KK/HlJ	LEWES/EiJ	MA/MyJ	NOD/ShiLtJ	NON/ShiLtJ	QSi3/Ianm	RIIIS/J	SJL/J	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs585999240					SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss916462669	MGP_WTSI_3_137151506	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:136857267 () rs orientation: forward

Symbol	Name	Function Class
Rr375787	regulatory region 375787	1217 bp upstream
Rr585922	regulatory region 585922	515 bp distal
Rr585923	regulatory region 585923	1805 bp proximal