rs584371194 SNP Detail

Summary

• ID
  rs584371194
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:33687831 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACGAA AGAACGAAAG AACGAAAGAA
  A
  GAAAGAAAGA AAGAAAGAAA GAAAG                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S1/SvImJ	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CZECHII/EiJ	FVB/NJ	JF1/MsJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	NZB/BlNJ	NZO/HlLtJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	SEA/GnJ	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ
ss917933660	MGP_WTSI_6_33710896	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S1/SvImJ	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CZECHII/EiJ	FVB/NJ	JF1/MsJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	NZB/BlNJ	NZO/HlLtJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	SEA/GnJ	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ
rs584371194					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss917933660	MGP_WTSI_6_33710896	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:33687831 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Exoc4	exocyst complex component 4			Intron
				Noncoding-Transcript-Variant
Rr628208	regulatory region 628208			931 bp proximal
Rr628209	regulatory region 628209			1511 bp proximal