rs583868681 SNP Detail

Summary

• ID
  rs583868681
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:13079637 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGAAC CTCTAAAACT GTAAGACAGT
  C
  AGCCCAGTAA AATGTTTACT CTTTG                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.RIII-H2 H2-T18/(71NS)SnJ	BUB/BnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C58/J	CAST/EiJ	CZECHII/EiJ	DBA/1J	DBA/2J	JF1/MsJ	LEWES/EiJ	MOLF/EiJ	NOD/ShiLtJ	PWK/PhJ	QSi5/Ianm	SPRET/EiJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
ss920210420	MGP_WTSI_10_13203893	EVA_MGPV3	EVA_MGPV3	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	B10.RIII-H2 H2-T18/(71NS)SnJ	BUB/BnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C58/J	CAST/EiJ	CZECHII/EiJ	DBA/1J	DBA/2J	JF1/MsJ	LEWES/EiJ	MOLF/EiJ	NOD/ShiLtJ	PWK/PhJ	QSi5/Ianm	SPRET/EiJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs583868681					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss920210420	MGP_WTSI_10_13203893	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:13079637 () rs orientation: forward

Symbol	Name	Function Class
Gm47402	predicted gene, 47402	1333 bp upstream
Rr427749	regulatory region 427749	1612 bp distal