rs583570613 SNP Detail

Summary

• ID
  rs583570613
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:50304700 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGAG AGGAGAGAAG GGGAGGGGAG
  A
  GGGAGAGGGA GAGGGAGAGG GAGAG                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BUB/BnJ	C3H/HeJ	C57BL/6J	C57BL/10J	C57BL/10SnJ	CBA/J	CE/J	CZECHII/EiJ	DBA/2J	I/LnJ	KK/HlJ	LG/J	NOD/ShiLtJ	NON/ShiLtJ	NZW/LacJ	PL/J	QSi3/Ianm	RF/J	SEA/GnJ	SJL/J	SM/J	ST/bJ	SWR/J
ss918003535	MGP_WTSI_6_50327720	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BUB/BnJ	C3H/HeJ	C57BL/6J	C57BL/10J	C57BL/10SnJ	CBA/J	CE/J	CZECHII/EiJ	DBA/2J	I/LnJ	KK/HlJ	LG/J	NOD/ShiLtJ	NON/ShiLtJ	NZW/LacJ	PL/J	QSi3/Ianm	RF/J	SEA/GnJ	SJL/J	SM/J	ST/bJ	SWR/J
rs583570613					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss918003535	MGP_WTSI_6_50327720	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:50304700 () rs orientation: forward

Symbol	Name	Function Class
Osbpl3	oxysterol binding protein-like 3	Intron
Rr629982	regulatory region 629982	1937 bp distal
Rr629983	regulatory region 629983	951 bp distal
Rr629984	regulatory region 629984	1135 bp proximal