rs581901673 SNP Detail

Summary

• ID
  rs581901673
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:145574807 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGAA AAAAGTAAAT TCATTAAATT
  R
  TGCATGGTGG TACGTGCCTG TAAAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129S5/SvEvBrd	AKR/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/6J	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	DBA/1J	DBA/2J	KK/HlJ	LEWES/EiJ	LP/J	NON/ShiLtJ	NZB/BlNJ	NZW/LacJ	PWK/PhJ	RF/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	WSB/EiJ
ss917133418	MGP_WTSI_4_145848237	EVA_MGPV3	EVA_MGPV3	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129S5/SvEvBrd	AKR/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/6J	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	DBA/1J	DBA/2J	KK/HlJ	LEWES/EiJ	LP/J	NON/ShiLtJ	NZB/BlNJ	NZW/LacJ	PWK/PhJ	RF/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	WSB/EiJ
rs581901673					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss917133418	MGP_WTSI_4_145848237	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:145574807 () rs orientation: forward

Symbol	Name	Function Class
Rr604403	regulatory region 604403	91 bp distal