rs581415956 SNP Detail

Summary

• ID
  rs581415956
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:147602727 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTTG GTTGAAATTG ATTTTGTTAC
  A
  GGAGAACTCA GAAGAAGGAC TGAGG                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BTBR T<+> Itpr3/J	C57BL/6J	C57BL/10J	C57BL/10SnJ	CE/J	CZECHII/EiJ	I/LnJ	KK/HlJ	LEWES/EiJ	LG/J	MOLF/EiJ	QSi3/Ianm	QSi5/Ianm	RIIIS/J
ss917138527	MGP_WTSI_4_147518270	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	BTBR T<+> Itpr3/J	C57BL/6J	C57BL/10J	C57BL/10SnJ	CE/J	CZECHII/EiJ	I/LnJ	KK/HlJ	LEWES/EiJ	LG/J	MOLF/EiJ	QSi3/Ianm	QSi5/Ianm	RIIIS/J
rs581415956					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss917138527	MGP_WTSI_4_147518270	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:147602727 () rs orientation: forward

Symbol	Name	Function Class
Gm69897	predicted gene, 69897	within coordinates
Rr398830	regulatory region 398830	1363 bp upstream
Rr604494	regulatory region 604494	715 bp proximal
Rr604495	regulatory region 604495	1822 bp proximal