rs581341720 SNP Detail

Summary

• ID
  rs581341720
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148267945 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACACA CACACACACA CAGACACACA
  S
  ACACACACAG ACACACACAC ACACA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.RIII-H2 H2-T18/(71NS)SnJ	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	CAST/EiJ	CZECHII/EiJ	DBA/2J	FVB/NJ	I/LnJ	NZO/HlLtJ	QSi3/Ianm	QSi5/Ianm	SEA/GnJ	ST/bJ
ss917140694	MGP_WTSI_4_148183488	EVA_MGPV3	EVA_MGPV3	f	SNP	C	G	C	C	C	C	C	C	G	C	C	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	B10.RIII-H2 H2-T18/(71NS)SnJ	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	CAST/EiJ	CZECHII/EiJ	DBA/2J	FVB/NJ	I/LnJ	NZO/HlLtJ	QSi3/Ianm	QSi5/Ianm	SEA/GnJ	ST/bJ
rs581341720					SNP	C	G	C	C	C	C	C	C	G	C	C	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss917140694	MGP_WTSI_4_148183488	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148267945 () rs orientation: forward

Symbol	Name	Function Class
Gm68601	predicted gene, 68601	within coordinates
Rr604623	regulatory region 604623	456 bp distal
Rr604624	regulatory region 604624	883 bp proximal