rs581231564 SNP Detail

Summary

• ID
  rs581231564
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:145573681 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAGG TGAATAAAAT AAATCTTTTT
  W
  AAAAATGAGT TGGGCTGGAA ATATG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	A/J	C57BL/6J	C57BR/cdJ	C58/J	DBA/2J	KK/HlJ	NZO/HlLtJ	QSi3/Ianm	QSi5/Ianm	SPRET/EiJ	WSB/EiJ	ZALENDE/EiJ
ss917133406	MGP_WTSI_4_145847111	EVA_MGPV3	EVA_MGPV3	f	SNP	T	A	A	T	T	T	A	A	A	A	T	T	T
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	A/J	C57BL/6J	C57BR/cdJ	C58/J	DBA/2J	KK/HlJ	NZO/HlLtJ	QSi3/Ianm	QSi5/Ianm	SPRET/EiJ	WSB/EiJ	ZALENDE/EiJ
rs581231564					SNP	T	A	A	T	T	T	A	A	A	A	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss917133406	MGP_WTSI_4_145847111	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:145573681 () rs orientation: forward

Symbol	Name	Function Class
Gm13236	predicted gene 13236	1475 bp downstream
Rr604403	regulatory region 604403	1014 bp proximal