rs579341195 SNP Detail

Summary

• ID
  rs579341195
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr15:39692786 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAGA GAGGGAGAGA GACAGGGAGA
  A
  GGAGGGGGAG GGAGAGAGAG AGAGA                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BTBR T<+> Itpr3/J	C57BL/6J	C57BL/10J	C57L/J	CZECHII/EiJ	JF1/MsJ	LG/J	MA/MyJ	MOLF/EiJ	RIIIS/J	SEA/GnJ	SM/J	SPRET/EiJ	ST/bJ	WSB/EiJ
ss922759727	MGP_WTSI_15_39829390	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	BTBR T<+> Itpr3/J	C57BL/6J	C57BL/10J	C57L/J	CZECHII/EiJ	JF1/MsJ	LG/J	MA/MyJ	MOLF/EiJ	RIIIS/J	SEA/GnJ	SM/J	SPRET/EiJ	ST/bJ	WSB/EiJ
rs579341195					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss922759727	MGP_WTSI_15_39829390	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:39692786 () rs orientation: forward

Symbol	Name	Function Class
Dpys	dihydropyrimidinase	Intron
Rr501538	regulatory region 501538	112 bp distal
Rr501539	regulatory region 501539	620 bp proximal